<?xml version="1.0" encoding="ascii"?>
<!DOCTYPE html PUBLIC "-//W3C//DTD XHTML 1.0 Transitional//EN"
          "DTD/xhtml1-transitional.dtd">
<html xmlns="http://www.w3.org/1999/xhtml" xml:lang="en" lang="en">
<head>
  <title>Everything</title>
  <link rel="stylesheet" href="epydoc.css" type="text/css" />
  <script type="text/javascript" src="epydoc.js"></script>
</head>

<body bgcolor="white" text="black" link="blue" vlink="#204080"
      alink="#204080">
<h1 class="toc">Everything</h1>
<hr />
  <h2 class="toc">All Classes</h2>
    <a target="mainFrame" href="trunk.BIP.Bayes.Melding.FitModel-class.html"
     >trunk.BIP.Bayes.Melding.FitModel</a><br />    <a target="mainFrame" href="trunk.BIP.Bayes.Melding.Meld-class.html"
     >trunk.BIP.Bayes.Melding.Meld</a><br />    <a target="mainFrame" href="trunk.BIP.Bayes.Samplers.MCMC.Dream-class.html"
     >trunk.BIP.Bayes.Samplers.MCMC.Dream</a><br />    <a target="mainFrame" href="trunk.BIP.Bayes.Samplers.MCMC.Metropolis-class.html"
     >trunk.BIP.Bayes.Samplers.MCMC.Metropolis</a><br />  <div class="private">
    <a target="mainFrame" href="trunk.BIP.Bayes.Samplers.MCMC._Sampler-class.html"
     >trunk.BIP.Bayes.Samplers.MCMC._Sampler</a><br />  </div>
  <div class="private">
    <a target="mainFrame" href="trunk.BIP.Bayes.general.bvariables._BayesVar-class.html"
     >trunk.BIP.Bayes.general.bvariables._BayesVar</a><br />  </div>
  <div class="private">
    <a target="mainFrame" href="trunk.BIP.Bayes.general.bvariables.__BayesC-class.html"
     >trunk.BIP.Bayes.general.bvariables.__BayesC</a><br />  </div>
  <div class="private">
    <a target="mainFrame" href="trunk.BIP.Bayes.general.bvariables.__BayesD-class.html"
     >trunk.BIP.Bayes.general.bvariables.__BayesD</a><br />  </div>
    <a target="mainFrame" href="trunk.BIP.SDE.gillespie.Model-class.html"
     >trunk.BIP.SDE.gillespie.Model</a><br />    <a target="mainFrame" href="trunk.BIP.SMC.condensation.Condensation-class.html"
     >trunk.BIP.SMC.condensation.Condensation</a><br />    <a target="mainFrame" href="trunk.BIP.SMC.condensation.GlobalData-class.html"
     >trunk.BIP.SMC.condensation.GlobalData</a><br />    <a target="mainFrame" href="trunk.BIP.SMC.condensation.IterationData-class.html"
     >trunk.BIP.SMC.condensation.IterationData</a><br />    <a target="mainFrame" href="trunk.BIP.SMC.condensation.Model-class.html"
     >trunk.BIP.SMC.condensation.Model</a><br />    <a target="mainFrame" href="trunk.BIP.Viz.ascii.Histogram-class.html"
     >trunk.BIP.Viz.ascii.Histogram</a><br />    <a target="mainFrame" href="trunk.BIP.Viz.asciihist.Histogram-class.html"
     >trunk.BIP.Viz.asciihist.Histogram</a><br />    <a target="mainFrame" href="trunk.BIP.Viz.realtime.RTplot-class.html"
     >trunk.BIP.Viz.realtime.RTplot</a><br />    <a target="mainFrame" href="trunk.BIP.Viz.realtime.RTpyplot-class.html"
     >trunk.BIP.Viz.realtime.RTpyplot</a><br />  <h2 class="toc">All Functions</h2>
    <a target="mainFrame" href="trunk.BIP.Bayes.Melding-module.html#basicfit"
     >trunk.BIP.Bayes.Melding.basicfit</a><br />    <a target="mainFrame" href="trunk.BIP.Bayes.Melding-module.html#enumRun"
     >trunk.BIP.Bayes.Melding.enumRun</a><br />    <a target="mainFrame" href="trunk.BIP.Bayes.Melding-module.html#main2"
     >trunk.BIP.Bayes.Melding.main2</a><br />    <a target="mainFrame" href="trunk.BIP.Bayes.Melding-module.html#mh_test"
     >trunk.BIP.Bayes.Melding.mh_test</a><br />    <a target="mainFrame" href="trunk.BIP.Bayes.Melding-module.html#model"
     >trunk.BIP.Bayes.Melding.model</a><br />    <a target="mainFrame" href="trunk.BIP.Bayes.Melding-module.html#plotRaHist"
     >trunk.BIP.Bayes.Melding.plotRaHist</a><br />    <a target="mainFrame" href="trunk.BIP.Bayes.PlotMeld-module.html#plot_par_series"
     >trunk.BIP.Bayes.PlotMeld.plot_par_series</a><br />    <a target="mainFrame" href="trunk.BIP.Bayes.PlotMeld-module.html#plot_par_violin"
     >trunk.BIP.Bayes.PlotMeld.plot_par_violin</a><br />    <a target="mainFrame" href="trunk.BIP.Bayes.PlotMeld-module.html#plot_pred"
     >trunk.BIP.Bayes.PlotMeld.plot_pred</a><br />    <a target="mainFrame" href="trunk.BIP.Bayes.PlotMeld-module.html#plot_series"
     >trunk.BIP.Bayes.PlotMeld.plot_series</a><br />    <a target="mainFrame" href="trunk.BIP.Bayes.PlotMeld-module.html#plot_series2"
     >trunk.BIP.Bayes.PlotMeld.plot_series2</a><br />    <a target="mainFrame" href="trunk.BIP.Bayes.PlotMeld-module.html#pred_new_cases"
     >trunk.BIP.Bayes.PlotMeld.pred_new_cases</a><br />    <a target="mainFrame" href="trunk.BIP.Bayes.PlotMeld-module.html#violin_plot"
     >trunk.BIP.Bayes.PlotMeld.violin_plot</a><br />    <a target="mainFrame" href="trunk.BIP.Bayes.general.bvariables-module.html#BayesVar"
     >trunk.BIP.Bayes.general.bvariables.BayesVar</a><br />    <a target="mainFrame" href="trunk.BIP.Bayes.lhs-module.html#lhs"
     >trunk.BIP.Bayes.lhs.lhs</a><br />    <a target="mainFrame" href="trunk.BIP.Bayes.lhs-module.html#lhsFromDensity"
     >trunk.BIP.Bayes.lhs.lhsFromDensity</a><br />    <a target="mainFrame" href="trunk.BIP.Bayes.lhs-module.html#lhsFromSample"
     >trunk.BIP.Bayes.lhs.lhsFromSample</a><br />    <a target="mainFrame" href="trunk.BIP.Bayes.lhs-module.html#rank_restr"
     >trunk.BIP.Bayes.lhs.rank_restr</a><br />    <a target="mainFrame" href="trunk.BIP.Bayes.like-module.html#Bernoulli"
     >trunk.BIP.Bayes.like.Bernoulli</a><br />    <a target="mainFrame" href="trunk.BIP.Bayes.like-module.html#Beta"
     >trunk.BIP.Bayes.like.Beta</a><br />    <a target="mainFrame" href="trunk.BIP.Bayes.like-module.html#Binomial"
     >trunk.BIP.Bayes.like.Binomial</a><br />    <a target="mainFrame" href="trunk.BIP.Bayes.like-module.html#Categor"
     >trunk.BIP.Bayes.like.Categor</a><br />    <a target="mainFrame" href="trunk.BIP.Bayes.like-module.html#Gamma"
     >trunk.BIP.Bayes.like.Gamma</a><br />    <a target="mainFrame" href="trunk.BIP.Bayes.like-module.html#Lognormal"
     >trunk.BIP.Bayes.like.Lognormal</a><br />    <a target="mainFrame" href="trunk.BIP.Bayes.like-module.html#Negbin"
     >trunk.BIP.Bayes.like.Negbin</a><br />    <a target="mainFrame" href="trunk.BIP.Bayes.like-module.html#Normal"
     >trunk.BIP.Bayes.like.Normal</a><br />    <a target="mainFrame" href="trunk.BIP.Bayes.like-module.html#Poisson"
     >trunk.BIP.Bayes.like.Poisson</a><br />    <a target="mainFrame" href="trunk.BIP.Bayes.like-module.html#Simple"
     >trunk.BIP.Bayes.like.Simple</a><br />    <a target="mainFrame" href="trunk.BIP.Bayes.like-module.html#Uniform"
     >trunk.BIP.Bayes.like.Uniform</a><br />    <a target="mainFrame" href="trunk.BIP.Bayes.like-module.html#Weibull"
     >trunk.BIP.Bayes.like.Weibull</a><br />    <a target="mainFrame" href="trunk.BIP.Bayes.like-module.html#find_best_tau"
     >trunk.BIP.Bayes.like.find_best_tau</a><br />    <a target="mainFrame" href="trunk.BIP.SDE.example-module.html#f1"
     >trunk.BIP.SDE.example.f1</a><br />    <a target="mainFrame" href="trunk.BIP.SDE.example-module.html#f2"
     >trunk.BIP.SDE.example.f2</a><br />    <a target="mainFrame" href="trunk.BIP.SDE.example-module.html#f3"
     >trunk.BIP.SDE.example.f3</a><br />    <a target="mainFrame" href="trunk.BIP.SDE.example-module.html#f4"
     >trunk.BIP.SDE.example.f4</a><br />    <a target="mainFrame" href="trunk.BIP.SDE.example-module.html#f5"
     >trunk.BIP.SDE.example.f5</a><br />    <a target="mainFrame" href="trunk.BIP.SDE.gillespie-module.html#dispatch"
     >trunk.BIP.SDE.gillespie.dispatch</a><br />    <a target="mainFrame" href="trunk.BIP.SDE.gillespie-module.html#main"
     >trunk.BIP.SDE.gillespie.main</a><br />    <a target="mainFrame" href="trunk.BIP.SDE.gillespie-module.html#p1"
     >trunk.BIP.SDE.gillespie.p1</a><br />    <a target="mainFrame" href="trunk.BIP.SDE.gillespie-module.html#p2"
     >trunk.BIP.SDE.gillespie.p2</a><br />    <a target="mainFrame" href="trunk.BIP.SMC.condensation-module.html#evaluate_gaussian"
     >trunk.BIP.SMC.condensation.evaluate_gaussian</a><br />  <h2 class="toc">All Variables</h2>
    <a target="mainFrame" href="trunk.BIP.Bayes.Melding-module.html#Viz"
     >trunk.BIP.Bayes.Melding.Viz</a><br />    <a target="mainFrame" href="trunk.BIP.Bayes.Melding-module.html#dtplot"
     >trunk.BIP.Bayes.Melding.dtplot</a><br />    <a target="mainFrame" href="trunk.BIP.Bayes.Melding-module.html#phiplot"
     >trunk.BIP.Bayes.Melding.phiplot</a><br />    <a target="mainFrame" href="trunk.BIP.Bayes.Melding-module.html#thplot"
     >trunk.BIP.Bayes.Melding.thplot</a><br />    <a target="mainFrame" href="trunk.BIP.Bayes.general.bvariables-module.html#continuous_conjugate_priors"
     >trunk.BIP.Bayes.general.bvariables.continuous_conjugate_priors</a><br />    <a target="mainFrame" href="trunk.BIP.Bayes.general.bvariables-module.html#discrete_conjugate_priors"
     >trunk.BIP.Bayes.general.bvariables.discrete_conjugate_priors</a><br />    <a target="mainFrame" href="trunk.BIP.SDE.example-module.html#CM"
     >trunk.BIP.SDE.example.CM</a><br />    <a target="mainFrame" href="trunk.BIP.SDE.example-module.html#M"
     >trunk.BIP.SDE.example.M</a><br />    <a target="mainFrame" href="trunk.BIP.SDE.example-module.html#ct"
     >trunk.BIP.SDE.example.ct</a><br />    <a target="mainFrame" href="trunk.BIP.SDE.example-module.html#ini"
     >trunk.BIP.SDE.example.ini</a><br />    <a target="mainFrame" href="trunk.BIP.SDE.example-module.html#propf"
     >trunk.BIP.SDE.example.propf</a><br />    <a target="mainFrame" href="trunk.BIP.SDE.example-module.html#pt"
     >trunk.BIP.SDE.example.pt</a><br />    <a target="mainFrame" href="trunk.BIP.SDE.example-module.html#r"
     >trunk.BIP.SDE.example.r</a><br />    <a target="mainFrame" href="trunk.BIP.SDE.example-module.html#t0"
     >trunk.BIP.SDE.example.t0</a><br />    <a target="mainFrame" href="trunk.BIP.SDE.example-module.html#tmat"
     >trunk.BIP.SDE.example.tmat</a><br />    <a target="mainFrame" href="trunk.BIP.SDE.example-module.html#vnames"
     >trunk.BIP.SDE.example.vnames</a><br />    <a target="mainFrame" href="trunk.BIP.SDE.gillespie-module.html#ser"
     >trunk.BIP.SDE.gillespie.ser</a><br />    <a target="mainFrame" href="trunk.BIP.Viz.asciihist-module.html#__licence__"
     >trunk.BIP.Viz.asciihist.__licence__</a><br /><hr />
<span class="options">[<a href="javascript:void(0);" class="privatelink"
    onclick="toggle_private();">hide&nbsp;private</a>]</span>

<script type="text/javascript">
  <!--
  // Private objects are initially displayed (because if
  // javascript is turned off then we want them to be
  // visible); but by default, we want to hide them.  So hide
  // them unless we have a cookie that says to show them.
  checkCookie();
  // -->
</script>
</body>
</html>
